MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus sp.
19428wD3_AN2
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 102
bases: 2,333,308 bps
CDS: 1,981
rRNA: 5
Repeat region:
tmRNA: 1
tRNA: 45
misc RNA:
Total features: 2,032
Total number of protein coding genes annotated/found:
1,981
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5029|JADGKY010000044.1
SEQF5029_01436
Genome Viewer
NA
AA
387/129
2444-2830
hypothetical protein
SEQF5029|JADGKY010000044.1
SEQF5029_01437
Genome Viewer
NA
AA
420/140
2843-3262
hypothetical protein
SEQF5029|JADGKY010000073.1
SEQF5029_01749
Genome Viewer
NA
AA
330/110
532-203
hypothetical protein
SEQF5029|JADGKY010000014.1
SEQF5029_00252
Genome Viewer
NA
AA
438/146
60-497
IS110 family transposase ISSsu7
SEQF5029|JADGKY010000014.1
SEQF5029_00253
Genome Viewer
NA
AA
1029/343
1777-749
Low specificity L-threonine aldolase
SEQF5029|JADGKY010000014.1
SEQF5029_00255
Genome Viewer
NA
AA
1206/402
3150-1945
30S Ribosomal protein S1
SEQF5029|JADGKY010000014.1
SEQF5029_00258
Genome Viewer
NA
AA
234/78
3852-3619
hypothetical protein
SEQF5029|JADGKY010000014.1
SEQF5029_00259
Genome Viewer
NA
AA
1029/343
4938-3910
Branched-chain-amino-acid aminotransferase
SEQF5029|JADGKY010000014.1
SEQF5029_00260
Genome Viewer
NA
AA
2415/805
7469-5055
DNA topoisomerase 4 subunit A
SEQF5029|JADGKY010000014.1
SEQF5029_00261
Genome Viewer
NA
AA
561/187
8418-7858
hypothetical protein
SEQF5029|JADGKY010000014.1
SEQF5029_00262
Genome Viewer
NA
AA
507/169
8952-8446
hypothetical protein
SEQF5029|JADGKY010000014.1
SEQF5029_00263
Genome Viewer
NA
AA
606/202
9590-8985
Protein adenylyltransferase NmFic
SEQF5029|JADGKY010000014.1
SEQF5029_00264
Genome Viewer
NA
AA
1950/650
11563-9614
DNA topoisomerase 4 subunit B
SEQF5029|JADGKY010000014.1
SEQF5029_00265
Genome Viewer
NA
AA
699/233
11652-12350
Glycerol-3-phosphate acyltransferase
SEQF5029|JADGKY010000014.1
SEQF5029_00266
Genome Viewer
NA
AA
1296/432
14099-12804
Dihydroorotase
SEQF5029|JADGKY010000014.1
SEQF5029_00267
Genome Viewer
NA
AA
465/155
14556-14092
8-oxo-dGTP diphosphatase
SEQF5029|JADGKY010000014.1
SEQF5029_00268
Genome Viewer
NA
AA
654/218
15218-14565
Uracil-DNA glycosylase
SEQF5029|JADGKY010000014.1
SEQF5029_00269
Genome Viewer
NA
AA
981/327
16209-15229
scyllo-inositol 2-dehydrogenase (NADP(+)) IolU
SEQF5029|JADGKY010000014.1
SEQF5029_00270
Genome Viewer
NA
AA
924/308
17164-16241
Putative glycosyltransferase CsbB
SEQF5029|JADGKY010000014.1
SEQF5029_00271
Genome Viewer
NA
AA
1488/496
18648-17161
hypothetical protein
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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